Hoffman2 - Revision history

Jonathan: /* R */

2023-02-27T21:09:33Z

← Older revision		Revision as of 21:09, 27 February 2023
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	You are probably a statistician, or you just prefer open-source software. Here's how to run R on Hoffman2.		You are probably a statistician, or you just prefer open-source software. Here's how to run R on Hoffman2.
	: [[Hoffman2:R]]		: [[Hoffman2:R]]

			[https://www.ccn.ucla.edu/wiki/index.php/Hoffman2:R:ggsegs R:ggsegs]

	=== WEKA ===		=== WEKA ===

2022-02-11T21:11:41Z

Software: add git page with redirect to "Setting Up and Using Git"

← Older revision		Revision as of 21:11, 11 February 2022
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	=== Getting an Account ===		=== Getting an Account ===
	You know what it is, now you want to use it. First you need an account.		You know what it is, now you want to use it. First, you need an account.
	: [[Hoffman2:Getting an Account]]		: [[Hoffman2:Getting an Account]]

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	Log in to Hoffman2 without typing your password every time.		Log in to Hoffman2 without typing your password every time.
	: [https://www.hoffman2.idre.ucla.edu/About/FAQ/FAQ.html#set-up-ssh-public-key-authentication Password-less ssh]		: [https://www.hoffman2.idre.ucla.edu/About/FAQ/FAQ.html#set-up-ssh-public-key-authentication Password-less ssh]


	== Computing ==		== Computing ==
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	=== R ===		=== R ===
	You are probably a statistician, or you just prefer open source software. Here's how to run R on Hoffman2.		You are probably a statistician, or you just prefer open-source software. Here's how to run R on Hoffman2.
	: [[Hoffman2:R]]		: [[Hoffman2:R]]

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	=== FSL ===		=== FSL ===
	FSL is a comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data.		FSL is a comprehensive library of analysis tools for FMRI, MRI, and DTI brain imaging data.
	: [[Hoffman2:FSL]]		: [[Hoffman2:FSL]]

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	=== Singularity ===		=== Singularity ===
	: [[Hoffman2:Singularity]]		: [[Hoffman2:Singularity]]

			=== Git ===
			: [[Hoffman2:Git]]


	== Productivity ==		== Productivity ==

2021-10-15T17:31:07Z

← Older revision		Revision as of 17:31, 15 October 2021
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	<!-- Anyone new to the lab and using Hoffman2 NEEDS to read the first section to have adequate working knowledge of the system. -->		<!-- Anyone new to the lab and using Hoffman2 NEEDS to read the first section to have adequate working knowledge of the system. -->

	~~== Status, maintenance and Issues ==~~
	~~Here's a list of known post maintenance issues of Hoffman2 : [[Hoffman2:Issues]]~~


	== Getting Started ==		== Getting Started ==

2021-10-15T17:30:39Z

← Older revision		Revision as of 17:30, 15 October 2021
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	<!-- Anyone new to the lab and using Hoffman2 NEEDS to read the first section to have adequate working knowledge of the system. -->		<!-- Anyone new to the lab and using Hoffman2 NEEDS to read the first section to have adequate working knowledge of the system. -->

			== Status, maintenance and Issues ==
			Here's a list of known post maintenance issues of Hoffman2 : [[Hoffman2:Issues]]

2021-08-12T22:14:11Z

Singularity

← Older revision		Revision as of 22:14, 12 August 2021
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	=== Singularity ===		=== Singularity ===
	: [[Hoffman2:Singularity]]		: [[Hoffman2:Singularity]]

	~~Singularity is a type of container technology, is provided in Hoffman2 currently.~~

	~~====How to use Singularity====~~
	~~In a CentOs 7 Node, load Singularity module as~~

	~~module load singularity~~

	== Productivity ==		== Productivity ==

2021-08-12T22:13:50Z

Singularity

← Older revision		Revision as of 22:13, 12 August 2021
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	=== Singularity ===		=== Singularity ===
	: [[Hoffman2:Singularity]]		: [[Hoffman2:Singularity]]

			Singularity is a type of container technology, is provided in Hoffman2 currently.

			====How to use Singularity====
			In a CentOs 7 Node, load Singularity module as

			module load singularity

	== Productivity ==		== Productivity ==

2021-08-12T22:10:36Z

2021-02-12T23:59:06Z

Password-less Logins

← Older revision		Revision as of 23:59, 12 February 2021
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	=== Password-less Logins ===		=== Password-less Logins ===
	Log in to Hoffman2 without typing your password every time.		Log in to Hoffman2 without typing your password every time.
	: [https://www.hoffman2.idre.ucla.edu/~~access~~/~~passwordless_ssh~~/ Password-less ssh]		: [https://www.hoffman2.idre.ucla.edu/About/FAQ/FAQ.html#set-up-ssh-public-key-authentication Password-less ssh]

	== Computing ==		== Computing ==

2020-06-05T22:34:17Z

Software: add python info

← Older revision		Revision as of 22:34, 5 June 2020
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	FSL is a comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data.		FSL is a comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data.
	: [[Hoffman2:FSL]]		: [[Hoffman2:FSL]]

			=== Python ===
			: [[Hoffman2:Python]]

	=== Jupyter Notebook ===		=== Jupyter Notebook ===

2020-04-02T18:19:10Z

Software

← Older revision		Revision as of 18:19, 2 April 2020
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	How to use MATLAB on the cluster. It is easier than you think. (Well, maybe...)		How to use MATLAB on the cluster. It is easier than you think. (Well, maybe...)
	: [[Hoffman2:MATLAB]]		: [[Hoffman2:MATLAB]]
			: [[Hoffman2:parpoolexample.m]]

	==== Compiling MATLAB ====		==== Compiling MATLAB ====